Research Highlights

2024

Feb
29
GlycoSHIELD – quantitative descriptions of the shielding effects and biological implications of protein glycosylation
Tsai YX, Chang NE, Reuter K, Chang HT, Yang TJ, von Bülow S, Sehrawat V, Zerrouki M, Tuffery M, Gecht M, Grothaus IL, Ciacchi LC, Wang YS, Hsu MF, Khoo KH, Hummer G, Hsu STD*, Hanus C*, Sikora M*

Proteins on the surface of cells and viruses are often cloaked in a dense sugar coating, a key factor in their host recognition

 
Feb 29 2024

2023

Oct
19
Deciphering purinosome assembly mechanism to open a new direction for cancer metabolism research
Chou MC, Wang YH, Chen FY, Kung CY, Wu KP, Kuo JC, Chan SJ, Cheng ML, Lin CY, Chou YC, Ho MC, Firestine S, Huang JR, Chen RH*

Metabolic reprogramming is a hallmark of cancer. Cancer cells alter various cellular metabolism pathways to meet the high demand

 
Oct 19 2023
Sep
11
CryoEM Reveals Mechanism Behind Polymyxin-Resistant Infections
Lou YC*, Huang HY, Yeh HH, Chiang WH, Chen C*, Wu KP*

In the escalating fight against drug-resistant Gram-negative bacteria, polymyxins are a last resort. Alarming is the rise of pol

 
Sep 11 2023
Aug
17
AI Accelerates Protein Design and Enhances Enzyme Activity
Kao HW, Lu WL, Ho MR, Lin YF, Hsieh YJ, Ko TP, Hsu STD, Wu KP*

Unlocking the potential of protein activation has historically posed challenges, necessitating extensive screening and biochemic

 
Aug 17 2023
Jul
05
Academia Sinica Team Discovers a New Method to Increase Carbon Fixation for Improving Carbon Balance
Lu KJ, Chang CW, Wang CH, Chen FY, Huang IY, Huang PH, Yang CH, Wu HY, Wu WJ, Hsu KC, Ho MC, Tsai MD*, Liao JC*

Human use of fossil fuels results in ~36 billion tons of carbon dioxide being released annually, severely impacting the carbon b

 
Jul 05 2023
May
30
Identification of a new target for sensitizing tumors to immune checkpoint blockade
Chen YH, Chen HH, Wang WJ, Chen HY, Huang WS, Kao CH, Lee SR, Yeat NY, Yan RL, Chan SJ, Wu KP, Chen RH*

Immune checkpoint blockades targeting PD-1/PD-L1 or CTLA4 have revolutionized the current cancer therapy paradigm based on their

 
May 30 2023

2022

Aug
23
Cryo-electron tomography reveals the structure and dynamics of an alphacoronavirus spike protein
Huang CY, Draczkowski P, Wang YS, Chang CY, Chien YC, Cheng YH, Wu YM, Wang CH, Chang YC, Chang YC, Yang TJ, Tsai YX, Khoo KH, Chang HW, Hsu STD*

Porcine epidemic diarrhea virus (PEDV) belongs to the alphacoronavirus family. PEDV is highly contagious and particularly lethal

 
Aug 23 2022
May
19
Molecular insights of how oncogene suppressor BAP1’s nuclear import is regulated by TNPO1
Yang TJ, Li TN, Huang RS, Pan MY, Lin SY, Lin S, Wu KP, Wang LH, Hsu STD*

BRCA1-associated protein 1 (BAP1) is an important tumor suppressor that belongs to the ubiquitin C-terminal hydrolase (UCH) fami

 
May 19 2022
Mar
07
A cell-free self-replenishing CO2-fixing system
Luo S, Lin PP, Nieh LY, Liao GB, Tang PW, Chen C, Liao JC*

Biological CO2 fixation is so far the most effective means for CO2 reduction at scale and accounts for most of the CO2 fixed on

 
Mar 07 2022

2021

Sep
16
Molecular insights into the increased transmissibility and immunity evasion of the SARS-CoV-2 Alpha variant
Yang TJ, Yu PY, Chang YC, Liang KH, Tso HC, Ho MR, Chen WY, Lin HT, Wu HC, Hsu STD*

The Alpha variant of SARS-CoV-2, also known as the B.1.1.7 strain, was first identified in the UK in late 2020. It soon spread a

 
Sep 16 2021
Mar
26
Identification of a novel autophagy regulatory mechanism for combating fatty liver
Chen YH, Huang TY, Lin YT, Lin SY, Li WH, Hsiao HJ, Yan RL, Tang HW, Shen ZQ, Chen GC, Wu KP, Tsai TF, Chen RH*

Fatty liver is a prevalent liver disease in Taiwan and worldwide and is associated with obesity, diabetes and cardiovascular dis

 
Mar 26 2021
Feb
19
Protein instability links to intellectual disability – a breakthrough in the cerebral development
Chiang SY, Wu HC, Lin SY, Chen HY, Wang CF, Yeh NH, Shih JH, Huang YS, Kuo HC, Chou SJ*, Chen RH*

Cerebral cortex is responsible for sensory, motor, emotional processing and higher cognitive functions. The development of cereb

 
Feb 19 2021
Jan
29
Perfection in the imperfection – molecular mechanism for genetic diversity
Luo SC, Yeh HY, Lan WH, Wu YM, Yang CH, Chang HY, Su GC, Lee CY, Wu WJ, Li HW, Ho MC*, Chi P*, Tsai MD*

Genetic diversity is a key driving force of evolution. During homologous recombination, chromosomes from father and mother will

 
Jan 29 2021

2020

Dec
14
A positive feedback loop between Flower and PI(4,5)P 2 at periactive zones controls bulk endocytosis in Drosophila
Tsai-Ning Li, Yu-Jung Chen, You-Tung Wang, Hsin-Chieh Lin, Ting-Yi Lu, Chi-Kuang Yao*

Synaptic vesicle (SV) endocytosis is coupled to exocytosis to maintain SV pool size and thus neurotransmitter release. Intense s

 
Dec 14 2020
Dec
14
Human CST complex protects stalled replication forks by directly blocking MRE11 degradation of nascent-strand DNA
Xinxing Lyu, Kai‐Hang Lei, Pau Biak Sang, Olga Shiva, Megan Chastain, Peter Chi*, Weihang Chai*

Degradation and collapse of stalled replication forks are main sources of genomic instability, yet the molecular mechanisms for

 
Dec 14 2020
Dec
01
Cross-species detection and bactericidal activity for pseudaminic acid-coated bacteria
I-Ming Lee, I-Fan Tu, Feng-Ling Yang and Shih-Hsiung Wu*

Pseudaminic acid (Pse), a unique carbohydrate in surface-associated glycans of pathogenic bacteria, has pivotal roles in virulen

 
Dec 01 2020
Nov
18
Protein post-translational modification – tyrosine dephosphorylation promotes autophagy precursor fusion and autophagosome formation
He-Yen Chou, Yi-Tang Lee, Yuchieh Jay Lin, Jung-Kun Wen, Wen-Hsin Peng, Pei-Lien Hsieh, Shu-Yu Lin, Chin-Chun Hung, Guang-Chao Chen*

The formation of the autophagosome is a dynamic and tightly regulated process. SNARE-mediated membrane fusion plays a pivotal ro

 
Nov 18 2020
Aug
24

Amidst the raging COVID-19 pandemic, the world remains under the unceasing threat of climate change. Academia Sinica President J

 
Aug 24 2020
Aug
12
Microcephaly family protein MCPH1 stabilizes RAD51 filaments
Chang HY, Lee CY, Lu CH, Lee W, Yang HL, Yeh HY, Li HW*, Chi P*

Microcephalin 1 (MCPH1) was identified from genetic mutations in patients with primary autosomal recessive microcephaly. In resp

 
Aug 12 2020
Jun
03

Delineating multiple N- and O-glycosylation sites on single glycopeptides and deriving more glycan structure information to disc

 
Jun 03 2020
May
22
Discovery of a dual function enzyme that catalyzes enyne formation in cyclohexanoid terpenoid biosynthesis
Yu-Rong Chen, Annavareddi Naresh, Suh-Yuen Liang, Chun-Hung Lin, Rong-Jie Chein*, Hsiao-Ching Lin*

A collaborative research between two teams led by Dr. Hsiao-Ching Lin, an assistant research fellow at the Institute of Biologic

 
May 22 2020
Apr
29
The Trojan horse strategy of Helicobacter pylori is revealed to hijack host cell membranes
Jan HM, Chen YC, Yang TC, Ong LL, Chang CC, Muthusamy S, Abera AB, Wu MS, Gervay-Hague J, Mong KT*, Lin CH*

Infecting more than half of the world’s population, Helicobacter pylori not only represents the most common etiological agent of

 
Apr 29 2020
Jan
16

The recent outbreaks of severe acute respiratory syndrome (SARS), the Middle East respiratory syndrome (MERS), and the severe pi

 
Jan 16 2020

2019

Nov
22
The enzymatic tools that catalyze a stepwise demethylation process on terpene scaffold
Chi-Fang Lee, Li-Xun Chen, Chen-Yu Chiang, Chen-Yu Lai, Hsiao-Ching Lin*

A research team led by Dr. Hsiao-Ching Lin, an assistant research fellow at the Institute of Biological Chemistry, has elucidate

 
Nov 22 2019
Sep
22

A research team led by Dr. Ruey-Hwa Chen, Distinguished Research Fellow at the Institute of Biological Chemistry, has discovered

 
Sep 22 2019
Jul
26

Increased oxidative stress is considered to be one of the key factors leading to aging and neurodegenerative diseases, but it is

 
Jul 26 2019
Jun
11
IBC Researchers Discovered That Human DNA Polymerase μ Can Use a Noncanonical Mechanism for Multiple Mn2+-mediated Functions
Chang YK, Huang YP, Liu XX, Ko TP, Bessho Y, Kawano Y, Maestre-Reyna M, Wu WJ*, Tsai MD*

A team led by Academician Ming-Daw Tsai, a Distinguished Research Fellow, and Dr. Wen-Jin (Winston) Wu, an Associate Research Sp

 
Jun 11 2019
Apr
18
Sharp Tools Make Good Work: The Early Success of ASCEM
Chen CY, Chang YC, Lin BL, Lin KF, Huang CH, Hsieh DL, Ko TP, Tsai MD*

Dr. Ming-Daw Tsai, Director of Academia Sinica Cryo-EM Center (ASCEM) and Distinguished Research Fellow of Institute of Biologic

 
Apr 18 2019
Mar
11
Rice submergence resistance mechanism
Lin CC, Chao YT, Chen WC, Ho HY, Chou MY, Li YR, Wu YL, Yang HA, Hsieh H, Lin CS, Wu FH, Chou SJ, Jen HC, Huang YH, Irene D, Wu WJ, Wu JL, Gibbs DJ, Ho MC*, Shih MC*

Rice can be drowned! Although rice is a semi-aquatic plant, the seedlings will die if they are submerged completely under water

 
Mar 11 2019

2018

Nov
05

Academician Andrew H.-J. Wang and his team at the Institute of Biological Chemistry have recently found that the C-terminal D/E-

 
Nov 05 2018
Jul
30
Pseudaminic acid on exopolysaccharide of Acinetobacter baumannii plays a critical role in phage-assisted preparation of glycoconjugate vaccine with high antigenicity
I-Ming Lee, Feng-Ling Yang, Te-Li, Chen, Kuo-Shiang Liao, Chien-Tai Ren, Nien-Tsung Lin, Yu-Pei Chang, Chung-Yi Wu* and Shih-Hsiung Wu*

Infection by antibiotic resistant bacterial pathogens poses a serious global health threat. Therefore, a new therapy is urgently

 
Jul 30 2018
Jun
12
Solving the acting target and molecular mechanism of Z-(+)-isochaihulactone
Jeffy Chern, Chun-Ping Lu, Zhanxiong Fang, Ching-Ming Chang, Kuo-Feng Hua, Yi-Ting Chen, Cheng Yang Ng, Yi-Lin Sophia Chen, Yulin Lam,* and Shih-Hsiung Wu*

Traditional medicines provide a fertile ground to explore potent “lead” compounds with desired effects; yet, their transformatio

 
Jun 12 2018

2017

Nov
16
Put a lid on it: the structure that allows the NlpI-Prc complex to degrade MepS in Escherichia coli
Ming-Yuan Su, Nilanjan Som, Chia-Yun Wu, Shih-Chieh Su, Yi-Ting Kuo, Lu-Chu Ke, Meng-Ru Ho, Shiou-Ru Tzeng, Ching-Hao Teng, Dominique Mengin-Lecreulx, Manjula Reddy & Chung-I Chang

By Cindy Lee

 
Nov 16 2017
Sep
25

Academician Ming-Daw Tsai, a Distinguished Research Fellow, and Dr. Wen-Jin Wu, an Associate Research Specialist at the Institut

 
Sep 25 2017
Sep
12
A green light for green chemistry: the discovery of new enzymes synthesizing alkaloid natural products
Lai CY, Lo IW, Hewage RT, Chen YC, Chen CT, Lee CF, Lin S, Tang MC, Lin HC*

In nature, living organisms use primary metabolites containing simple building blocks as their starting materials. An important

 
Sep 12 2017
Aug
21
Degradation of PML tumor suppressor fosters an immunosuppressive and prometastatic tumor microenvironment
Wang YT, Chen J, Chang CW, Jen J, Huang TY, Chen CM, Shen R, Liang SY, Cheng IC, Yang SC, Lai WW, Cheng KH, Hsieh TS, Lai MZ, Cheng HC, Wang YC, Chen RH

Recent advances in cancer biology have evolved to consider cancers as complex “rough” organs in which transformed cells along wi

 
Aug 21 2017
Aug
18
Peptide Nasal Spray to Delay Onset of Alzheimer’s disease
Cheng YS, Chen ZT, Liao TY, Lin C, Shen HC, Wang YH, Chang CW, Liu RS, Chen RP*, Tu PH*

Dr. Rita P.-Y. Chen, an Associate Research Fellow at the Institute of Biological Chemistry along with Dr. Pang-hsien Tu, a forme

 
Aug 18 2017

2016

Aug
18
Curcumin Derivatives May Prevent Alzheimer’s Disease by Promoting Amyloid-β Clearance
Po-Ting Chen, Zih-ten Chen, Wen-Chi Hou, Lung-Chih Yu, Rita P.-Y. Chen

Dr. Rita P.-Y. Chen and her research team at the Institute of Biological Chemistry has recently discovered that polyhydroxycurcu

 
Aug 18 2016
May
03
New Research Highlight on the Lon Protease
1. Lin CC, Su SC, Su MY, Liang PH, Feng CC, Wu SH, Chang CI
2. Su SC, Lin CC, Tai HC, Chang MY, Ho MR, Babu CS, Liao JH, Wu SH, Chang YC, Lim C, Chang CI

Though geographically compact, Taiwan is a hot spring of resources. In fact, researching “extreme” organisms from hot springs ma

 
May 03 2016
Jan
13
Discovery of Key Autophagy Terminator that Contributes to Cell Survival and Muscle Homeostasis
Liu CC, Lin YC, Chen YH, Chen CM, Pang LY, Chen HA, Wu PR, Lin MY, Jiang ST, Tsai TF, Chen RH*

A team led by Dr. Ruey-Hwa Chen, a Distinguished Research Fellow at the Institute of Biological Chemistry recently discovered th

 
Jan 13 2016

2015

Dec
04
The Comparative Studies of Binding Activity of Curcumin and Didemethylated Curcumin with Selenite: Hydrogen Bonding vs Acid-Base Interactions
Liao JH, Wu TH, Chen MY, Chen WT, Lu SY, Wang YH, Wang SP, Hsu YM, Huang YS, Huang ZY, Lin YC, Chang CM, Huang FY, Wu SH

In this report, the in vitro relative capabilities of curcumin (CCM) and didemethylated curcumin (DCCM) in preventing the seleni

 
Dec 04 2015
Apr
07
Substrate Specificity and Plasticity of FERM-Containing Protein Tyrosine Phosphatases
Chen KE, Li MY, Chou CC, Ho MR, Chen GC, Meng TC*, Wang AH*

Epidermal growth factor receptor (EGFR) pathway substrate 15 (Eps15) is a newly identified substrate for protein tyrosine phosph

 
Apr 07 2015

2014

Dec
19

Ras signaling cascade has long been considered as an attractive therapeutic target for colorectal cancer (CRC) where PTPN3 is hi

 
Dec 19 2014
May
19
Rules are Made to be Broken: How a Viral DNA Polymerase Breaks the Golden Watson-Crick Rule
Wu WJ, Su MI, Wu JL, Kumar S, Lim LH, Wang CW, Nelissen FH, Chen MC, Doreleijers JF, Wijmenga SS, Tsai MD*

Replication of DNA occurs in all living organisms and forms the basis of biological inheritance. Replication of DNA famously occ

 
May 19 2014

2013

Dec
24
Molecular Evidence to Show How Autophagy Serves as a Protective Mechanism against Oxidative Stress
Hong-Wen Tang, Hsiao-Man Liao, Wen-Hsin Peng, Hong-Ru Lin, Chun-Hong Chen, Guang-Chao Chen*

Research team led by Dr. Guang-Chao Chen used fruit fly (Drosophila) adult midgut and mammalian cells to investigate the role of

 
Dec 24 2013
Sep
05
XIAP/Caspase-7 Complex as Drug-Resistant Cancer Cell Target
Lin YF, Lai TC, Chang CK, Chen CL, Huang MS, Yang CJ, Liu HG, Dong JJ, Chou YA, Teng KH, Chen SH, Tian WT, Jan YH, Hsiao M, Liang PH*

Research team led by Dr. Po-Huang Liang has identified a small-molecule inhibitor I-Lys, which can activate Caspase-7 to selecti

 
Sep 05 2013
Sep
05
Vaccinia A27 Protein Structure Revealed to Regulate Virus Cell Membrane Fusion with Host
Chang TH, Chang SJ, Hsieh FL, Ko TP, Lin CT, Ho MR, Wang I, Hsu ST, Guo RT, Chang W, Wang AH

Research teams led by Dr. Andrew H.-J. Wang (IBC) and Dr. Wen Chang (IMB) have joined the effort to solve the crystal structure

 
Sep 05 2013
Aug
22

L-Fucose-containing glycoconjugates play an indispensible role in a myriad of physiological and pathological activities, such as

 
Aug 22 2013
Aug
09
Meiothermus taiwanensis Protein Structure Revealed – Shedding Light on New Drug Designs
Liao JH, Ihara K, Kuo CI, Huang KF, Wakatsuki S, Wu SH, Chang CI

A research team led by Associate Research Fellow Dr. Chung-I Chang and Distinguished Research Fellow Dr. Shih-Hsiung Wu from the

 
Aug 09 2013
Jun
27
Detail Mechanism Involved in Staphylococci Resistance to Antibiotics
Chang YM, Chen CK, Ko TP, Chang-Chien MW, Wang AH*

Staphylococci cause a wide range of diseases in human and animals such as skin infections, pneumonia, food poisoning and bl

 
Jun 27 2013

2012

Jul
15
miR-103/107 promote metastasis of colorectal cancer by targeting the metastasis suppressors DAPK and KLF4
Chen HY, Lin YM, Chung HC, Lang YD, Lin CJ, Huang J, Wang WC, Lin FM, Chen Z, Huang HD, Shyy JY, Liang JT*, Chen RH*

Metastasis is the major cause of poor prognosis in colorectal cancer (CRC), and increasing evidence supports the contribution of

 
Jul 15 2012
Jul
01

NkBgl, a β-glucosidase from Neotermes koshunensis, is a β-retaining glycosyl hydrolase family 1 enzyme that cleaves β-glucosidic

 
Jul 01 2012
Jun
11
In vivo tagging and characterization of S-glutathionylated proteins by a chemoenzymatic method
Chiang BY, Chou CC, Hsieh FT, Gao S, Lin JC, Lin SH, Chen TC, Khoo KH*, Lin CH*

Glutathionylspermidine synthetase (GspS) was introduced into human cells to label endogenous glutathione (GSH) with biotinyl spe

 
Jun 11 2012

2011

Aug
16

Forced entry: NMR spectroscopy and isothermal titration calorimetry show that calcium ions are chelated by the hydroxylated THF

 
Aug 16 2011
Aug
16
A Cullin3-KLHL20 Ubiquitin ligase-dependent pathway targets PML to potentiate HIF-1 signaling and prostate cancer progression
Yuan WC, Lee YR, Huang SF, Lin YM, Chen TY, Chung HC, Tsai CH, Chen HY, Chiang CT, Lai CK, Lu LT, Chen CH, Gu DL, Pu YS, Jou YS, Lu KP, Hsiao PW, Shih HM, Chen RH*

Tumor hypoxia is associated with disease progression and treatment failure, but the hypoxia signaling mechanism is not fully und

 
Aug 16 2011
Feb
16

Autophagy is a membrane-mediated degradation process of macromolecule recycling. Although the formation of double-membrane degra

 
Feb 16 2011

2010

Dec
14
Mechanism of action and inhibition of dehydrosqualene synthase
Lin FY, Liu CI, Liu YL, Zhang Y, Wang K, Jeng WY, Ko TP, Cao R, Wang AH*, Oldfield E*

"Head-to-head" terpene synthases catalyze the first committed steps in sterol and carotenoid biosynthesis: the condensation of t

 
Dec 14 2010
May
19

Death-associated protein kinase (DAPK) was identified as a mediator of interferon (IFN)-induced cell death. How IFN controls DAP

 
May 19 2010
Feb
05

Terpenes (isoprenoids), derived from isoprenyl pyrophosphates, are versatile natural compounds that act as metabolism mediators,

 
Feb 05 2010
Jan
08

Two loops were found to move inward toward the α-fucosidase active site to produce a closed conformation of complexes with inhib

 
Jan 08 2010

2009

Dec
01

Encapsulated Klebsiella pneumoniae is the predominant causative agent of pyogenic liver abscess, an emerging infectious disease

 
Dec 01 2009
Aug
25
Role for α-l-fucosidase in the control of Helicobacter pylori-infected gastric cancer cells
Liu TW, Ho CW, Huang HH, Chang SM, Popat SD, Wang YT, Wu MS, Chen YJ, Lin CH*

Infecting about one-half of the global human population, Helicobacter pylori is well established as the primary cause of gastrit

 
Aug 25 2009
Feb
01

Sperm motility and maturation are known to be affected by a host of factors encountered en route in both male and female genital

 
Feb 01 2009